CRISPRone

CRISPRone report for GCA_011882285.1_ASM1188228v1

♦ Seq 1: JAATNI010000540.1 Clostridioides difficile strain HC31A NODE_862_length_40571_cov_45.130783, whole genome shotgun sequence

⇒Summary: seq-len = 40673 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATNI010000260.1 Clostridioides difficile strain HC31A NODE_512_length_48128_cov_40.127743, whole genome shotgun sequence

⇒Summary: seq-len = 48230 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44135-44425 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATNI010000261.1 Clostridioides difficile strain HC31A NODE_513_length_6816_cov_31.632042, whole genome shotgun sequence

⇒Summary: seq-len = 6918 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2539-3822 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATNI010000289.1 Clostridioides difficile strain HC31A NODE_544_length_26360_cov_52.247913, whole genome shotgun sequence

⇒Summary: seq-len = 26462 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14470-14697 bp]: array | spacers
           [Locus range 17364-17525 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATNI010000186.1 Clostridioides difficile strain HC31A NODE_366_length_11048_cov_19.729635, whole genome shotgun sequence

⇒Summary: seq-len = 11150 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5104-5857 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATNI010000093.1 Clostridioides difficile strain HC31A NODE_241_length_34757_cov_50.341427, whole genome shotgun sequence

⇒Summary: seq-len = 34859 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13531-14084 bp]: array | spacers
           [Locus range 15914-16204 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATNI010000382.1 Clostridioides difficile strain HC31A NODE_698_length_3479_cov_23.698765, whole genome shotgun sequence

⇒Summary: seq-len = 3581 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2989-3217 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATNI010000454.1 Clostridioides difficile strain HC31A NODE_774_length_5019_cov_16.008966, whole genome shotgun sequence

⇒Summary: seq-len = 5121 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2096-2253 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATNI010000290.1 Clostridioides difficile strain HC31A NODE_545_length_10760_cov_33.655949, whole genome shotgun sequence

⇒Summary: seq-len = 10862 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9958-10845 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)