CRISPRone

CRISPRone report for GCA_012029735.1_ASM1202973v1

♦ Seq 1: JAAUXH010000001.1 Clostridioides difficile strain HC164 NODE_1_length_253901_cov_22.3385, whole genome shotgun sequence

⇒Summary: seq-len = 253900 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 75436-75730 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAUXH010000029.1 Clostridioides difficile strain HC164 NODE_29_length_56848_cov_18.3979, whole genome shotgun sequence

⇒Summary: seq-len = 56848 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38477-39036 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAUXH010000004.1 Clostridioides difficile strain HC164 NODE_4_length_190744_cov_26.4053, whole genome shotgun sequence

⇒Summary: seq-len = 190744 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4518-4810 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAUXH010000003.1 Clostridioides difficile strain HC164 NODE_3_length_211982_cov_22.443, whole genome shotgun sequence

⇒Summary: seq-len = 211982 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 102058-102616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAUXH010000005.1 Clostridioides difficile strain HC164 NODE_5_length_169013_cov_25.8438, whole genome shotgun sequence

⇒Summary: seq-len = 169013 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 143971-145641 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAUXH010000054.1 Clostridioides difficile strain HC164 NODE_54_length_18306_cov_16.9586, whole genome shotgun sequence

⇒Summary: seq-len = 18269 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5149-5308 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAUXH010000034.1 Clostridioides difficile strain HC164 NODE_34_length_39533_cov_18.9017, whole genome shotgun sequence

⇒Summary: seq-len = 39533 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 130-1279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAUXH010000014.1 Clostridioides difficile strain HC164 NODE_14_length_101626_cov_25.1046, whole genome shotgun sequence

⇒Summary: seq-len = 101626 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 98661-99609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAUXH010000013.1 Clostridioides difficile strain HC164 NODE_13_length_102353_cov_24.3723, whole genome shotgun sequence

⇒Summary: seq-len = 102353 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4722-5736 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)