CRISPRone

CRISPRone report for GCA_012029785.1_ASM1202978v1

♦ Seq 1: JAAUXM010000049.1 Clostridioides difficile strain HU74 NODE_49_length_17502_cov_19.8708, whole genome shotgun sequence

⇒Summary: seq-len = 17460 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8645-9853 bp]: array | spacers
           [Locus range 11630-12970 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAUXM010000027.1 Clostridioides difficile strain HU74 NODE_27_length_49605_cov_30.0138, whole genome shotgun sequence

⇒Summary: seq-len = 49605 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16156-16514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAUXM010000013.1 Clostridioides difficile strain HU74 NODE_13_length_111789_cov_28.8402, whole genome shotgun sequence

⇒Summary: seq-len = 111789 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90439-92108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAUXM010000023.1 Clostridioides difficile strain HU74 NODE_23_length_58061_cov_23.603, whole genome shotgun sequence

⇒Summary: seq-len = 58061 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 55397-55625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAUXM010000034.1 Clostridioides difficile strain HU74 NODE_34_length_33870_cov_41.1392, whole genome shotgun sequence

⇒Summary: seq-len = 33870 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7123-7412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAUXM010000055.1 Clostridioides difficile strain HU74 NODE_55_length_11281_cov_19.9762, whole genome shotgun sequence

⇒Summary: seq-len = 11236 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAUXM010000002.1 Clostridioides difficile strain HU74 NODE_2_length_317493_cov_32.6261, whole genome shotgun sequence

⇒Summary: seq-len = 317493 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 256765-258691 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAUXM010000035.1 Clostridioides difficile strain HU74 NODE_35_length_33350_cov_28.0457, whole genome shotgun sequence

⇒Summary: seq-len = 33350 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6852-7935 bp]: array | spacers
           [Locus range 9813-10298 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)