CRISPRone

CRISPRone report for GCA_012029835.1_ASM1202983v1

♦ Seq 1: JAATWP010000003.1 Clostridioides difficile strain OC96 NODE_3_length_139406_cov_40.7294, whole genome shotgun sequence

⇒Summary: seq-len = 139281 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATWP010000044.1 Clostridioides difficile strain OC96 NODE_44_length_36083_cov_42.1755, whole genome shotgun sequence

⇒Summary: seq-len = 36083 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25382-25477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATWP010000012.1 Clostridioides difficile strain OC96 NODE_12_length_102435_cov_36.7897, whole genome shotgun sequence

⇒Summary: seq-len = 102435 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3541-4367 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATWP010000023.1 Clostridioides difficile strain OC96 NODE_23_length_74242_cov_30.1396, whole genome shotgun sequence

⇒Summary: seq-len = 74242 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 66759-67841 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATWP010000009.1 Clostridioides difficile strain OC96 NODE_9_length_113953_cov_35.2746, whole genome shotgun sequence

⇒Summary: seq-len = 113953 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3854-4079 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATWP010000002.1 Clostridioides difficile strain OC96 NODE_2_length_195832_cov_43.994, whole genome shotgun sequence

⇒Summary: seq-len = 195832 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6311-6998 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATWP010000021.1 Clostridioides difficile strain OC96 NODE_21_length_80766_cov_32.8949, whole genome shotgun sequence

⇒Summary: seq-len = 80766 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7343-9348 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATWP010000007.1 Clostridioides difficile strain OC96 NODE_7_length_127831_cov_36.171, whole genome shotgun sequence

⇒Summary: seq-len = 127831 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120755-121645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATWP010000041.1 Clostridioides difficile strain OC96 NODE_41_length_39843_cov_31.5292, whole genome shotgun sequence

⇒Summary: seq-len = 39843 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21366-21859 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)