CRISPRone

CRISPRone report for GCA_012029845.1_ASM1202984v1

♦ Seq 1: JAATWO010000027.1 Clostridioides difficile strain HC89 NODE_27_length_50380_cov_34.7167, whole genome shotgun sequence

⇒Summary: seq-len = 50380 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2743-4149 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATWO010000049.1 Clostridioides difficile strain HC89 NODE_49_length_25203_cov_26.3266, whole genome shotgun sequence

⇒Summary: seq-len = 25203 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19944-20104 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATWO010000060.1 Clostridioides difficile strain HC89 NODE_60_length_17340_cov_15.8067, whole genome shotgun sequence

⇒Summary: seq-len = 17340 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11197-11492 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATWO010000002.1 Clostridioides difficile strain HC89 NODE_2_length_229215_cov_47.9223, whole genome shotgun sequence

⇒Summary: seq-len = 229215 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 224000-225014 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATWO010000047.1 Clostridioides difficile strain HC89 NODE_47_length_29105_cov_25.8211, whole genome shotgun sequence

⇒Summary: seq-len = 29105 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10204-11293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATWO010000031.1 Clostridioides difficile strain HC89 NODE_31_length_48244_cov_34.2933, whole genome shotgun sequence

⇒Summary: seq-len = 48244 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATWO010000032.1 Clostridioides difficile strain HC89 NODE_32_length_48142_cov_23.1412, whole genome shotgun sequence

⇒Summary: seq-len = 48142 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18824-20040 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATWO010000001.1 Clostridioides difficile strain HC89 NODE_1_length_242226_cov_36.6739, whole genome shotgun sequence

⇒Summary: seq-len = 242226 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19151-20887 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATWO010000006.1 Clostridioides difficile strain HC89 NODE_6_length_127778_cov_32.1821, whole genome shotgun sequence

⇒Summary: seq-len = 127778 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 73054-73611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATWO010000004.1 Clostridioides difficile strain HC89 NODE_4_length_142647_cov_39.4377, whole genome shotgun sequence

⇒Summary: seq-len = 142647 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5337-5695 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)