CRISPRone

CRISPRone report for GCA_012029905.1_ASM1202990v1

♦ Seq 1: JAATWN010000025.1 Clostridioides difficile strain HC20 NODE_25_length_47486_cov_27.2198, whole genome shotgun sequence

⇒Summary: seq-len = 47486 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5280-6886 bp]: array | spacers
           [Locus range 42556-42912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATWN010000099.1 Clostridioides difficile strain HC20 NODE_99_length_9323_cov_19.5838, whole genome shotgun sequence

⇒Summary: seq-len = 9323 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATWN010000003.1 Clostridioides difficile strain HC20 NODE_3_length_123107_cov_26.5272, whole genome shotgun sequence

⇒Summary: seq-len = 123106 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 72275-72695 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATWN010000094.1 Clostridioides difficile strain HC20 NODE_94_length_11496_cov_28.1502, whole genome shotgun sequence

⇒Summary: seq-len = 11496 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATWN010000134.1 Clostridioides difficile strain HC20 NODE_134_length_3812_cov_9.68575, whole genome shotgun sequence

⇒Summary: seq-len = 3812 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2302-3253 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATWN010000010.1 Clostridioides difficile strain HC20 NODE_10_length_72786_cov_34.4724, whole genome shotgun sequence

⇒Summary: seq-len = 72786 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 29281-31741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATWN010000074.1 Clostridioides difficile strain HC20 NODE_74_length_19280_cov_25.3334, whole genome shotgun sequence

⇒Summary: seq-len = 19280 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11968-12128 bp]: array | spacers
           [Locus range 12190-13072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATWN010000055.1 Clostridioides difficile strain HC20 NODE_55_length_24633_cov_29.8019, whole genome shotgun sequence

⇒Summary: seq-len = 24633 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14374-14733 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATWN010000005.1 Clostridioides difficile strain HC20 NODE_5_length_107429_cov_23.9138, whole genome shotgun sequence

⇒Summary: seq-len = 107429 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 100797-101612 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATWN010000023.1 Clostridioides difficile strain HC20 NODE_23_length_48911_cov_24.1044, whole genome shotgun sequence

⇒Summary: seq-len = 48911 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24322-25142 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)