CRISPRone

CRISPRone report for GCA_012030135.1_ASM1203013v1

♦ Seq 1: JAAUXI010000043.1 Clostridioides difficile strain HC204 NODE_43_length_4738_cov_30.4376, whole genome shotgun sequence

⇒Summary: seq-len = 4738 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1267-2084 bp]: array | spacers
           [Locus range 2687-3241 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAUXI010000003.1 Clostridioides difficile strain HC204 NODE_3_length_254283_cov_35.9431, whole genome shotgun sequence

⇒Summary: seq-len = 254283 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 10095-10652 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAUXI010000008.1 Clostridioides difficile strain HC204 NODE_8_length_163299_cov_27.7911, whole genome shotgun sequence

⇒Summary: seq-len = 163299 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 89577-89803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAUXI010000009.1 Clostridioides difficile strain HC204 NODE_9_length_160461_cov_32.4948, whole genome shotgun sequence

⇒Summary: seq-len = 160461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112823-114563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAUXI010000010.1 Clostridioides difficile strain HC204 NODE_10_length_160307_cov_37.1383, whole genome shotgun sequence

⇒Summary: seq-len = 160307 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8730-9156 bp]: array | spacers
           [Locus range 22949-23375 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAUXI010000030.1 Clostridioides difficile strain HC204 NODE_30_length_26328_cov_25.1516, whole genome shotgun sequence

⇒Summary: seq-len = 26328 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12836-12929 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAUXI010000007.1 Clostridioides difficile strain HC204 NODE_7_length_171361_cov_33.1257, whole genome shotgun sequence

⇒Summary: seq-len = 171361 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4337-4564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAUXI010000002.1 Clostridioides difficile strain HC204 NODE_2_length_350931_cov_34.0592, whole genome shotgun sequence

⇒Summary: seq-len = 350931 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38470-39228 bp]: array | spacers
           [Locus range 155578-155999 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)