CRISPRone

CRISPRone report for GCA_012030445.1_ASM1203044v1

♦ Seq 1: JAATWQ010000001.1 Clostridioides difficile strain OC101 NODE_1_length_77679_cov_34.7888, whole genome shotgun sequence

⇒Summary: seq-len = 77679 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50973-51265 bp]: array | spacers
           [Locus range 52948-53174 bp]: array | spacers
           [Locus range 55036-55531 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATWQ010000181.1 Clostridioides difficile strain OC101 NODE_181_length_7090_cov_8.1396, whole genome shotgun sequence

⇒Summary: seq-len = 7045 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5131-5747 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATWQ010000319.1 Clostridioides difficile strain OC101 NODE_319_length_3281_cov_4.03329, whole genome shotgun sequence

⇒Summary: seq-len = 3281 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1250-1410 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATWQ010000149.1 Clostridioides difficile strain OC101 NODE_149_length_8919_cov_8.52627, whole genome shotgun sequence

⇒Summary: seq-len = 8919 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATWQ010000188.1 Clostridioides difficile strain OC101 NODE_188_length_6819_cov_7.98745, whole genome shotgun sequence

⇒Summary: seq-len = 6819 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 47-337 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATWQ010000378.1 Clostridioides difficile strain OC101 NODE_378_length_2167_cov_5.13922, whole genome shotgun sequence

⇒Summary: seq-len = 2167 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1002-2141 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATWQ010000252.1 Clostridioides difficile strain OC101 NODE_252_length_5230_cov_6.75936, whole genome shotgun sequence

⇒Summary: seq-len = 5230 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47-140 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATWQ010000261.1 Clostridioides difficile strain OC101 NODE_261_length_4942_cov_13.5416, whole genome shotgun sequence

⇒Summary: seq-len = 4942 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3907-4264 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATWQ010000311.1 Clostridioides difficile strain OC101 NODE_311_length_3392_cov_8.449, whole genome shotgun sequence

⇒Summary: seq-len = 3392 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2717-3408 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATWQ010000263.1 Clostridioides difficile strain OC101 NODE_263_length_4839_cov_6.11099, whole genome shotgun sequence

⇒Summary: seq-len = 4839 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAATWQ010000158.1 Clostridioides difficile strain OC101 NODE_158_length_8286_cov_5.08163, whole genome shotgun sequence

⇒Summary: seq-len = 8286 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5938-6496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JAATWQ010000254.1 Clostridioides difficile strain OC101 NODE_254_length_5137_cov_6.1998, whole genome shotgun sequence

⇒Summary: seq-len = 5137 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3989-5139 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)