CRISPRone

CRISPRone report for GCA_012102895.1_ASM1210289v1

♦ Seq 1: JAAVSO010000024.1 Clostridioides difficile strain OC108 NODE_24_length_41609_cov_20.3394, whole genome shotgun sequence

⇒Summary: seq-len = 41609 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34887-35114 bp]: array | spacers
           [Locus range 37781-37942 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAVSO010000214.1 Clostridioides difficile strain OC108 NODE_214_length_1246_cov_7.90259, whole genome shotgun sequence

⇒Summary: seq-len = 1246 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33-1246 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAVSO010000189.1 Clostridioides difficile strain OC108 NODE_189_length_3255_cov_5.14834, whole genome shotgun sequence

⇒Summary: seq-len = 3255 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1142-1236 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAVSO010000090.1 Clostridioides difficile strain OC108 NODE_90_length_14942_cov_12.3544, whole genome shotgun sequence

⇒Summary: seq-len = 14942 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12052-13065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAVSO010000050.1 Clostridioides difficile strain OC108 NODE_50_length_29054_cov_14.8217, whole genome shotgun sequence

⇒Summary: seq-len = 29054 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10253-10740 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAVSO010000173.1 Clostridioides difficile strain OC108 NODE_173_length_4770_cov_15.3931, whole genome shotgun sequence

⇒Summary: seq-len = 4770 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 694-854 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAVSO010000054.1 Clostridioides difficile strain OC108 NODE_54_length_26633_cov_13.6113, whole genome shotgun sequence

⇒Summary: seq-len = 26633 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20003-20759 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAVSO010000142.1 Clostridioides difficile strain OC108 NODE_142_length_8181_cov_10.6387, whole genome shotgun sequence

⇒Summary: seq-len = 8181 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2924-3479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAVSO010000063.1 Clostridioides difficile strain OC108 NODE_63_length_22442_cov_10.1691, whole genome shotgun sequence

⇒Summary: seq-len = 22442 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1689-3028 bp]: array | spacers
           [Locus range 3121-3279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAAVSO010000023.1 Clostridioides difficile strain OC108 NODE_23_length_41951_cov_18.996, whole genome shotgun sequence

⇒Summary: seq-len = 41951 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)