CRISPRone

CRISPRone report for GCA_012276915.1_ASM1227691v1

♦ Seq 1: JAAXLM010000107.1 Clostridioides difficile strain OC110 NODE_107_length_11861_cov_12.0338, whole genome shotgun sequence

⇒Summary: seq-len = 11861 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAXLM010000228.1 Clostridioides difficile strain OC110 NODE_228_length_1668_cov_3.04153, whole genome shotgun sequence

⇒Summary: seq-len = 1668 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1094-1649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAXLM010000143.1 Clostridioides difficile strain OC110 NODE_143_length_6950_cov_6.38268, whole genome shotgun sequence

⇒Summary: seq-len = 6950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 625-920 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAXLM010000002.1 Clostridioides difficile strain OC110 NODE_2_length_82431_cov_16.4482, whole genome shotgun sequence

⇒Summary: seq-len = 82430 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12295-13309 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAXLM010000144.1 Clostridioides difficile strain OC110 NODE_144_length_6922_cov_5.86225, whole genome shotgun sequence

⇒Summary: seq-len = 6922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1740-1900 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAXLM010000096.1 Clostridioides difficile strain OC110 NODE_96_length_14646_cov_14.0738, whole genome shotgun sequence

⇒Summary: seq-len = 14646 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10331-10889 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAXLM010000077.1 Clostridioides difficile strain OC110 NODE_77_length_19425_cov_11.3626, whole genome shotgun sequence

⇒Summary: seq-len = 19425 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18823-19380 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAXLM010000346.1 Clostridioides difficile strain OC110 NODE_346_length_780_cov_1.17611, whole genome shotgun sequence

⇒Summary: seq-len = 780 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAXLM010000066.1 Clostridioides difficile strain OC110 NODE_66_length_22724_cov_8.63349, whole genome shotgun sequence

⇒Summary: seq-len = 22724 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 13651-15322 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAAXLM010000168.1 Clostridioides difficile strain OC110 NODE_168_length_4944_cov_9.94915, whole genome shotgun sequence

⇒Summary: seq-len = 4944 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3808-4690 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAAXLM010000055.1 Clostridioides difficile strain OC110 NODE_55_length_24816_cov_12.8591, whole genome shotgun sequence

⇒Summary: seq-len = 24754 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21353-21912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)