CRISPRone

CRISPRone report for GCA_012276925.1_ASM1227692v1

♦ Seq 1: JAAXLN010000389.1 Clostridioides difficile strain HC115 NODE_389_length_1287_cov_4.72931, whole genome shotgun sequence

⇒Summary: seq-len = 1287 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 251-809 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAXLN010000129.1 Clostridioides difficile strain HC115 NODE_129_length_11098_cov_9.0618, whole genome shotgun sequence

⇒Summary: seq-len = 11098 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6074-6236 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAXLN010000043.1 Clostridioides difficile strain HC115 NODE_43_length_21921_cov_11.5459, whole genome shotgun sequence

⇒Summary: seq-len = 21921 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAXLN010000306.1 Clostridioides difficile strain HC115 NODE_306_length_3137_cov_4.91096, whole genome shotgun sequence

⇒Summary: seq-len = 3137 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67-1216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAXLN010000188.1 Clostridioides difficile strain HC115 NODE_188_length_7395_cov_5.11434, whole genome shotgun sequence

⇒Summary: seq-len = 7395 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1138-1625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAXLN010000173.1 Clostridioides difficile strain HC115 NODE_173_length_8147_cov_8.06521, whole genome shotgun sequence

⇒Summary: seq-len = 8147 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3576-4134 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAXLN010000087.1 Clostridioides difficile strain HC115 NODE_87_length_14946_cov_9.58607, whole genome shotgun sequence

⇒Summary: seq-len = 14946 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4468-4760 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAXLN010000334.1 Clostridioides difficile strain HC115 NODE_334_length_2617_cov_7.9494, whole genome shotgun sequence

⇒Summary: seq-len = 2617 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2071-2624 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAXLN010000121.1 Clostridioides difficile strain HC115 NODE_121_length_11703_cov_6.64902, whole genome shotgun sequence

⇒Summary: seq-len = 11703 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9796-10936 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAAXLN010000093.1 Clostridioides difficile strain HC115 NODE_93_length_14510_cov_14.5445, whole genome shotgun sequence

⇒Summary: seq-len = 14509 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 231-786 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAAXLN010000284.1 Clostridioides difficile strain HC115 NODE_284_length_3813_cov_6.55724, whole genome shotgun sequence

⇒Summary: seq-len = 3813 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97-1047 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)