CRISPRone

CRISPRone report for GCA_012276945.1_ASM1227694v1

♦ Seq 1: JAAXLR010000008.1 Clostridioides difficile strain HC208 NODE_8_length_96852_cov_21.2823, whole genome shotgun sequence

⇒Summary: seq-len = 96852 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAXLR010000023.1 Clostridioides difficile strain HC208 NODE_23_length_68490_cov_18.8196, whole genome shotgun sequence

⇒Summary: seq-len = 68443 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAXLR010000032.1 Clostridioides difficile strain HC208 NODE_32_length_45463_cov_15.9676, whole genome shotgun sequence

⇒Summary: seq-len = 45463 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16524-16882 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAXLR010000096.1 Clostridioides difficile strain HC208 NODE_96_length_3583_cov_11.1534, whole genome shotgun sequence

⇒Summary: seq-len = 3583 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3156-3583 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAXLR010000048.1 Clostridioides difficile strain HC208 NODE_48_length_27853_cov_16.3377, whole genome shotgun sequence

⇒Summary: seq-len = 27853 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 24642-25916 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAXLR010000055.1 Clostridioides difficile strain HC208 NODE_55_length_24916_cov_19.6192, whole genome shotgun sequence

⇒Summary: seq-len = 24916 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16-504 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAXLR010000047.1 Clostridioides difficile strain HC208 NODE_47_length_29884_cov_13.8653, whole genome shotgun sequence

⇒Summary: seq-len = 29884 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22845-22940 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAXLR010000045.1 Clostridioides difficile strain HC208 NODE_45_length_30675_cov_13.526, whole genome shotgun sequence

⇒Summary: seq-len = 30675 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 21871-22760 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAXLR010000042.1 Clostridioides difficile strain HC208 NODE_42_length_32694_cov_18.0779, whole genome shotgun sequence

⇒Summary: seq-len = 32694 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13509-13934 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAAXLR010000001.1 Clostridioides difficile strain HC208 NODE_1_length_224573_cov_24.9589, whole genome shotgun sequence

⇒Summary: seq-len = 224573 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 184903-185196 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAAXLR010000017.1 Clostridioides difficile strain HC208 NODE_17_length_78962_cov_22.5884, whole genome shotgun sequence

⇒Summary: seq-len = 78962 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30436-30712 bp]: array | spacers
           [Locus range 63356-63647 bp]: array | spacers
           [Locus range 66447-67068 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JAAXLR010000087.1 Clostridioides difficile strain HC208 NODE_87_length_8006_cov_16.2357, whole genome shotgun sequence

⇒Summary: seq-len = 8006 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3706-4259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)