CRISPRone

CRISPRone report for GCA_012276965.1_ASM1227696v1

♦ Seq 1: JAAXLO010000264.1 Clostridioides difficile strain HC139 NODE_264_length_1658_cov_4.51404, whole genome shotgun sequence

⇒Summary: seq-len = 1658 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-84 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAXLO010000042.1 Clostridioides difficile strain HC139 NODE_42_length_26344_cov_11.0083, whole genome shotgun sequence

⇒Summary: seq-len = 26344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21875-22233 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAXLO010000004.1 Clostridioides difficile strain HC139 NODE_4_length_63794_cov_30.859, whole genome shotgun sequence

⇒Summary: seq-len = 63794 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23138-23623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAXLO010000043.1 Clostridioides difficile strain HC139 NODE_43_length_26059_cov_11.5746, whole genome shotgun sequence

⇒Summary: seq-len = 26059 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAXLO010000067.1 Clostridioides difficile strain HC139 NODE_67_length_19526_cov_7.42863, whole genome shotgun sequence

⇒Summary: seq-len = 19526 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14521-15539 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAXLO010000110.1 Clostridioides difficile strain HC139 NODE_110_length_12988_cov_6.01656, whole genome shotgun sequence

⇒Summary: seq-len = 12988 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9449-10065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAXLO010000101.1 Clostridioides difficile strain HC139 NODE_101_length_14121_cov_8.5954, whole genome shotgun sequence

⇒Summary: seq-len = 14074 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 152-509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAXLO010000114.1 Clostridioides difficile strain HC139 NODE_114_length_12523_cov_6.37811, whole genome shotgun sequence

⇒Summary: seq-len = 12523 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6408-6771 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAXLO010000031.1 Clostridioides difficile strain HC139 NODE_31_length_32215_cov_8.89092, whole genome shotgun sequence

⇒Summary: seq-len = 32215 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 23560-25160 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAAXLO010000058.1 Clostridioides difficile strain HC139 NODE_58_length_20790_cov_9.94783, whole genome shotgun sequence

⇒Summary: seq-len = 20743 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7292-7385 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAAXLO010000078.1 Clostridioides difficile strain HC139 NODE_78_length_17457_cov_10.6353, whole genome shotgun sequence

⇒Summary: seq-len = 17457 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9922-11071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JAAXLO010000195.1 Clostridioides difficile strain HC139 NODE_195_length_5167_cov_4.72679, whole genome shotgun sequence

⇒Summary: seq-len = 5167 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2027-2188 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: JAAXLO010000003.1 Clostridioides difficile strain HC139 NODE_3_length_75318_cov_11.7225, whole genome shotgun sequence

⇒Summary: seq-len = 75318 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38991-39415 bp]: array | spacers
           [Locus range 41019-41243 bp]: array | spacers
           [Locus range 43036-43922 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)