CRISPRone

CRISPRone report for GCA_012277125.1_ASM1227712v1

♦ Seq 1: JAAXLP010000015.1 Clostridioides difficile strain HC142 NODE_15_length_92527_cov_18.1913, whole genome shotgun sequence

⇒Summary: seq-len = 92527 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53124-54273 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAXLP010000005.1 Clostridioides difficile strain HC142 NODE_5_length_157457_cov_23.3395, whole genome shotgun sequence

⇒Summary: seq-len = 157457 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 83699-85369 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAXLP010000038.1 Clostridioides difficile strain HC142 NODE_38_length_30458_cov_31.1541, whole genome shotgun sequence

⇒Summary: seq-len = 30458 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5268-5427 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAXLP010000028.1 Clostridioides difficile strain HC142 NODE_28_length_58730_cov_21.8722, whole genome shotgun sequence

⇒Summary: seq-len = 58730 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 54171-54729 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAXLP010000020.1 Clostridioides difficile strain HC142 NODE_20_length_83918_cov_30.9715, whole genome shotgun sequence

⇒Summary: seq-len = 83918 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79981-80995 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAXLP010000044.1 Clostridioides difficile strain HC142 NODE_44_length_17540_cov_12.8451, whole genome shotgun sequence

⇒Summary: seq-len = 17540 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6015-6309 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAXLP010000002.1 Clostridioides difficile strain HC142 NODE_2_length_235642_cov_23.6826, whole genome shotgun sequence

⇒Summary: seq-len = 235642 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAAXLP010000001.1 Clostridioides difficile strain HC142 NODE_1_length_383099_cov_23.9157, whole genome shotgun sequence

⇒Summary: seq-len = 383064 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 196964-197256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAAXLP010000008.1 Clostridioides difficile strain HC142 NODE_8_length_145961_cov_26.4132, whole genome shotgun sequence

⇒Summary: seq-len = 145961 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 54764-55711 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAAXLP010000011.1 Clostridioides difficile strain HC142 NODE_11_length_131531_cov_19.7818, whole genome shotgun sequence

⇒Summary: seq-len = 131531 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112420-112979 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)