CRISPRone

CRISPRone report for GCA_012277145.1_ASM1227714v1

♦ Seq 1: JAAXLQ010000005.1 Clostridioides difficile strain HC191 NODE_5_length_327963_cov_46.875, whole genome shotgun sequence

⇒Summary: seq-len = 327963 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 254158-255828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAAXLQ010000022.1 Clostridioides difficile strain HC191 NODE_22_length_39513_cov_36.7982, whole genome shotgun sequence

⇒Summary: seq-len = 39513 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110-1259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAAXLQ010000017.1 Clostridioides difficile strain HC191 NODE_17_length_61666_cov_38.8049, whole genome shotgun sequence

⇒Summary: seq-len = 61666 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2924-3939 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAAXLQ010000007.1 Clostridioides difficile strain HC191 NODE_7_length_160243_cov_39.0187, whole genome shotgun sequence

⇒Summary: seq-len = 160243 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 141872-142431 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAAXLQ010000004.1 Clostridioides difficile strain HC191 NODE_4_length_458537_cov_48.4833, whole genome shotgun sequence

⇒Summary: seq-len = 458537 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299228-300176 bp]: array | spacers
           [Locus range 351088-351248 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAAXLQ010000002.1 Clostridioides difficile strain HC191 NODE_2_length_485463_cov_43.8249, whole genome shotgun sequence

⇒Summary: seq-len = 485463 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90954-91248 bp]: array | spacers
           [Locus range 299363-299655 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAAXLQ010000001.1 Clostridioides difficile strain HC191 NODE_1_length_486195_cov_48.7278, whole genome shotgun sequence

⇒Summary: seq-len = 486195 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239928-240485 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)