CRISPRone

CRISPRone report for GCA_012844105.1_ASM1284410v1

♦ Seq 1: JABAGK010000027.1 Bacteroides fragilis strain COR2-248-WT-1 Contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 69760 bp; # of CRISPR array = 1; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31830-41562 bp Zoom in on locus 1 x6 CRISPR array Location: 31830-32210 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 31830-32210 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09725:cas2 Type: universal Location: 32658-32948 bp Gene: cd09634:cas1 Type: universal Location: 32942-35212 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 35232-36119 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 36124-37533 bp Gene: unk Type: unknown Location: 37547-38026 bp Gene: cash17:cash17 Type: Type- Location: 38023-39450 bp Gene: unk Type: unknown Location: 39495-40274 bp Gene: unk Type: unknown Location: 40250-40876 bp Gene: cls000004:cas6 Type: other Location: 40894-41562 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31830-32210 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABAGK010000001.1 Bacteroides fragilis strain COR2-248-WT-1 Contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 602508 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 422781-426394 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 422781-423680 bp Gene: unk Type: unknown Location: 423677-424942 bp Gene: unk Type: unknown Location: 424950-425723 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 425726-426394 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)