CRISPRone

CRISPRone report for GCA_012956705.1_ASM1295670v1

♦ Seq 1: JABBZG010000001.1 Clostridioides difficile strain HU58 NODE_1_length_257003_cov_29.9513, whole genome shotgun sequence

⇒Summary: seq-len = 257003 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113428-114709 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABBZG010000036.1 Clostridioides difficile strain HU58 NODE_36_length_38397_cov_43.7419, whole genome shotgun sequence

⇒Summary: seq-len = 38397 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24668-24957 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JABBZG010000061.1 Clostridioides difficile strain HU58 NODE_61_length_9583_cov_29.5832, whole genome shotgun sequence

⇒Summary: seq-len = 9583 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3897-4256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JABBZG010000020.1 Clostridioides difficile strain HU58 NODE_20_length_73712_cov_28.0568, whole genome shotgun sequence

⇒Summary: seq-len = 73712 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53186-54924 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JABBZG010000060.1 Clostridioides difficile strain HU58 NODE_60_length_11175_cov_56.0728, whole genome shotgun sequence

⇒Summary: seq-len = 11175 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8903-9327 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JABBZG010000014.1 Clostridioides difficile strain HU58 NODE_14_length_93017_cov_26.9249, whole genome shotgun sequence

⇒Summary: seq-len = 93017 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45188-45810 bp]: array | spacers
           [Locus range 87429-87591 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JABBZG010000012.1 Clostridioides difficile strain HU58 NODE_12_length_96544_cov_27.6255, whole genome shotgun sequence

⇒Summary: seq-len = 96544 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91495-91721 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JABBZG010000022.1 Clostridioides difficile strain HU58 NODE_22_length_66234_cov_28.6504, whole genome shotgun sequence

⇒Summary: seq-len = 66234 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18062-18954 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JABBZG010000008.1 Clostridioides difficile strain HU58 NODE_8_length_126433_cov_29.357, whole genome shotgun sequence

⇒Summary: seq-len = 126433 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)