CRISPRone

CRISPRone report for GCA_012956715.1_ASM1295671v1

♦ Seq 1: JABBZH010000007.1 Clostridioides difficile strain HC131 NODE_7_length_102732_cov_20.3591, whole genome shotgun sequence

⇒Summary: seq-len = 102732 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77505-79175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABBZH010000002.1 Clostridioides difficile strain HC131 NODE_2_length_180827_cov_20.8323, whole genome shotgun sequence

⇒Summary: seq-len = 180827 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2215-2509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JABBZH010000056.1 Clostridioides difficile strain HC131 NODE_56_length_23143_cov_17.0383, whole genome shotgun sequence

⇒Summary: seq-len = 23143 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20218-21166 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JABBZH010000001.1 Clostridioides difficile strain HC131 NODE_1_length_245368_cov_19.5191, whole genome shotgun sequence

⇒Summary: seq-len = 245368 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 102126-102684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JABBZH010000025.1 Clostridioides difficile strain HC131 NODE_25_length_61152_cov_17.698, whole genome shotgun sequence

⇒Summary: seq-len = 61152 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3466-4481 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JABBZH010000039.1 Clostridioides difficile strain HC131 NODE_39_length_39106_cov_18.2211, whole genome shotgun sequence

⇒Summary: seq-len = 39106 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34-852 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JABBZH010000037.1 Clostridioides difficile strain HC131 NODE_37_length_42790_cov_17.9856, whole genome shotgun sequence

⇒Summary: seq-len = 42790 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24419-24978 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JABBZH010000088.1 Clostridioides difficile strain HC131 NODE_88_length_7374_cov_8.44211, whole genome shotgun sequence

⇒Summary: seq-len = 7374 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5099-5258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JABBZH010000073.1 Clostridioides difficile strain HC131 NODE_73_length_14241_cov_31.7217, whole genome shotgun sequence

⇒Summary: seq-len = 14241 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5076-5369 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)