CRISPRone

CRISPRone report for GCA_013177095.1_ASM1317709v1

♦ Seq 1: JABLSZ010000001.1 Pseudomonas aeruginosa strain S11 NODE_1_length_668578_cov_131.926, whole genome shotgun sequence

⇒Summary: seq-len = 668578 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 364936-375998 bp Zoom in on locus 1 x18 x13 CRISPR array Location: 364936-366002 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 364936-366002 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09641:cas3HD Type: Type-I Location: 366778-369459 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 369462-371030 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 371027-371557 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 371567-372709 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 372711-373373 bp Gene: pfam08798:cas6e Type: other Location: 373348-373959 bp Gene: cd09719:cas1 Type: universal Location: 373986-374876 bp Gene: pfam09707:cas2 Type: universal Location: 374873-375172 bp CRISPR array Location: 375237-375998 bp Num of repeats: 13 Spacers: s18-s29 CRISPR array Location: 375237-375998 bp Num of repeats: 13 Spacers: s18-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 364936-366002 bp]: array | spacers
           [Locus range 375237-375998 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)