CRISPRone

CRISPRone report for GCA_013177135.1_ASM1317713v1

♦ Seq 1: JABLSY010000027.1 Pseudomonas aeruginosa strain S12 NODE_27_length_67545_cov_130.871, whole genome shotgun sequence

⇒Summary: seq-len = 67545 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20808-30227 bp Zoom in on locus 1 x11 x4 CRISPR array Location: 20808-21436 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 20808-21436 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 21696-22670 bp Gene: COG1203:cas3 Type: Type-I Location: 22667-25552 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 25646-25897 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 25955-27259 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27246-28229 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28240-29268 bp Gene: cd09739:cas6f Type: other Location: 29272-29835 bp CRISPR array Location: 30019-30227 bp Num of repeats: 4 Spacers: s11-s13 CRISPR array Location: 30019-30227 bp Num of repeats: 4 Spacers: s11-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20808-21436 bp]: array | spacers
           [Locus range 30019-30227 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)