CRISPRone

CRISPRone report for GCA_013177195.1_ASM1317719v1

♦ Seq 1: JABLSO010000001.1 Pseudomonas aeruginosa strain S7 NODE_1_length_651153_cov_136.025, whole genome shotgun sequence

⇒Summary: seq-len = 651153 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 358433-369250 bp Zoom in on locus 1 x7 x20 CRISPR array Location: 358433-358828 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 358433-358828 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09641:cas3HD Type: Type-I Location: 359603-362284 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 362287-363855 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 363852-364382 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 364392-365534 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 365536-366198 bp Gene: pfam08798:cas6e Type: other Location: 366173-366784 bp Gene: COG1518:cas1 Type: universal Location: 366811-367245 bp Gene: COG1518:cas1 Type: universal Location: 367252-367701 bp Gene: pfam09707:cas2 Type: universal Location: 367698-367997 bp CRISPR array Location: 368062-369250 bp Num of repeats: 20 Spacers: s7-s25 CRISPR array Location: 368062-369250 bp Num of repeats: 20 Spacers: s7-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 358433-358828 bp]: array | spacers
           [Locus range 368062-369250 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)