CRISPRone

CRISPRone report for GCA_013178495.1_ASM1317849v1

♦ Seq 1: JABLTX010000036.1 Pseudomonas aeruginosa strain PASP527 NODE_36_length_67824_cov_19.6526, whole genome shotgun sequence

⇒Summary: seq-len = 67824 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36556-47000 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36556-37244 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36556-37244 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37493-38056 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38060-39088 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39099-40082 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40069-41373 bp Gene: COG1203:cas3 Type: Type-I Location: 41431-44661 bp Gene: cd09718:cas1 Type: universal Location: 44658-45632 bp CRISPR array Location: 45893-47000 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 45893-47000 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36556-37244 bp]: array | spacers
           [Locus range 45893-47000 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)