CRISPRone

CRISPRone report for GCA_013178515.1_ASM1317851v1

♦ Seq 1: JABLTZ010000019.1 Pseudomonas aeruginosa strain PASP499 NODE_19_length_102956_cov_10.9927, whole genome shotgun sequence

⇒Summary: seq-len = 102956 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 155-963 bp Zoom in on locus 1 x14 CRISPR array Location: 155-963 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 155-963 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 155-963 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABLTZ010000015.1 Pseudomonas aeruginosa strain PASP499 NODE_15_length_123854_cov_23.2628, whole genome shotgun sequence

⇒Summary: seq-len = 123854 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33406-38878 bp Zoom in on locus 1 Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 33406-34056 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 34063-35106 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 35106-35861 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 35890-36615 bp Gene: cd09708:DinG Type: Subtype-IV-A Location: 36704-38878 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JABLTZ010000027.1 Pseudomonas aeruginosa strain PASP499 NODE_27_length_84967_cov_11.6447, whole genome shotgun sequence

⇒Summary: seq-len = 84967 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61467-68255 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 61467-62498 bp Gene: unk Type: unknown Location: 62943-63833 bp Gene: pfam13280:WYL Type: other Location: 64113-65021 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 65034-68255 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)