CRISPRone

CRISPRone report for GCA_013178735.1_ASM1317873v1

♦ Seq 1: JABLUM010000021.1 Pseudomonas aeruginosa strain PASP251 NODE_21_length_112210_cov_79.1801, whole genome shotgun sequence

⇒Summary: seq-len = 112210 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132-881 bp Zoom in on locus 1 x13 CRISPR array Location: 132-881 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 132-881 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 132-881 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABLUM010000052.1 Pseudomonas aeruginosa strain PASP251 NODE_52_length_12112_cov_82.0774, whole genome shotgun sequence

⇒Summary: seq-len = 12112 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1382-11981 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 1382-2490 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1382-2490 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 2673-3236 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3240-4268 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 4279-5262 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5249-6550 bp Gene: COG1203:cas3 Type: Type-I Location: 6961-10191 bp Gene: cd09718:cas1 Type: universal Location: 10188-11162 bp CRISPR array Location: 11414-11981 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 11414-11981 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1382-2490 bp]: array | spacers
           [Locus range 11414-11981 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)