CRISPRone

CRISPRone report for GCA_013178845.1_ASM1317884v1

♦ Seq 1: JABLUR010000001.1 Pseudomonas aeruginosa strain PASP048 NODE_1_length_589644_cov_13.0282, whole genome shotgun sequence

⇒Summary: seq-len = 589644 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 295370-307407 bp Zoom in on locus 1 x29 x18 CRISPR array Location: 295370-297108 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 295370-297108 bp Num of repeats: 29 Spacers: s1-s28 Gene: pfam09707:cas2 Type: universal Location: 297173-297472 bp Gene: cd09719:cas1 Type: universal Location: 297469-298359 bp Gene: pfam08798:cas6e Type: other Location: 298386-298925 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 298972-299634 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 299636-300778 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 300788-301318 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 301315-302883 bp Gene: cd09641:cas3HD Type: Type-I Location: 302886-305567 bp CRISPR array Location: 306342-307407 bp Num of repeats: 18 Spacers: s29-s45 CRISPR array Location: 306342-307407 bp Num of repeats: 18 Spacers: s29-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 295370-297108 bp]: array | spacers
           [Locus range 306342-307407 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)