CRISPRone

CRISPRone report for GCA_013178875.1_ASM1317887v1

♦ Seq 1: JABLUN010000025.1 Pseudomonas aeruginosa strain PASP208 NODE_25_length_80088_cov_50.5927, whole genome shotgun sequence

⇒Summary: seq-len = 80088 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36398-48397 bp Zoom in on locus 1 x19 x39 CRISPR array Location: 36398-37506 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36398-37506 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 37689-38252 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38256-39284 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39295-40278 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40265-41569 bp Gene: COG1203:cas3 Type: Type-I Location: 41627-44857 bp Gene: cd09718:cas1 Type: universal Location: 44854-45828 bp CRISPR array Location: 46090-48397 bp Num of repeats: 39 Spacers: s19-s56 CRISPR array Location: 46090-48397 bp Num of repeats: 39 Spacers: s19-s56 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36398-37506 bp]: array | spacers
           [Locus range 46090-48397 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)