CRISPRone

CRISPRone report for GCA_013240425.1_ASM1324042v1

♦ Seq 1: JAATIL010000002.1 Pseudomonas aeruginosa strain DVT415, whole genome shotgun sequence

⇒Summary: seq-len = 1513547 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1026826-1037425 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 1026826-1027394 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1026826-1027394 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1027645-1028619 bp Gene: COG1203:cas3 Type: Type-I Location: 1028616-1031846 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1032257-1033558 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1033545-1034528 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1034539-1035567 bp Gene: cd09739:cas6f Type: other Location: 1035571-1036134 bp CRISPR array Location: 1036318-1037425 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 1036318-1037425 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1026826-1027394 bp]: array | spacers
           [Locus range 1036318-1037425 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATIL010000001.1 Pseudomonas aeruginosa strain DVT415, whole genome shotgun sequence

⇒Summary: seq-len = 3689047 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 868857-869605 bp Zoom in on locus 1 x13 CRISPR array Location: 868857-869605 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 868857-869605 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 868857-869605 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)