CRISPRone

CRISPRone report for GCA_013240475.1_ASM1324047v1

♦ Seq 1: JAATIM010000001.1 Pseudomonas aeruginosa strain DVT411, whole genome shotgun sequence

⇒Summary: seq-len = 6299548 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2688358-2698060 bp Zoom in on locus 1 x14 x2 x3 CRISPR array Location: 2688358-2689166 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 2688358-2689166 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 2689349-2689912 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2689916-2690944 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2690955-2691938 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2691925-2693229 bp Gene: COG1203:cas3 Type: Type-I Location: 2693287-2696517 bp Gene: cd09718:cas1 Type: universal Location: 2696514-2697488 bp CRISPR array Location: 2697753-2697840 bp Num of repeats: 2 Spacers: s14-s14 CRISPR array Location: 2697753-2697840 bp Num of repeats: 2 Spacers: s14-s14 CRISPR array Location: 2697913-2698060 bp Num of repeats: 3 Spacers: s15-s16 CRISPR array Location: 2697913-2698060 bp Num of repeats: 3 Spacers: s15-s16 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2688358-2689166 bp]: array | spacers
           [Locus range 2697753-2697840 bp]: array | spacers
           [Locus range 2697913-2698060 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)