CRISPRone

CRISPRone report for GCA_013255565.1_ASM1325556v1

♦ Seq 1: CP053917.1 Pseudomonas aeruginosa strain PSE6684 chromosome, complete genome

⇒Summary: seq-len = 6924367 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5185976-5196430 bp Zoom in on locus 1 x11 x10 CRISPR array Location: 5185976-5186617 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 5185976-5186617 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09641:cas3HD Type: Type-I Location: 5187392-5190073 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 5190076-5191644 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 5191641-5192171 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 5192181-5193323 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 5193325-5193987 bp Gene: pfam08798:cas6e Type: other Location: 5193962-5194573 bp Gene: cd09719:cas1 Type: universal Location: 5194600-5195490 bp Gene: pfam09707:cas2 Type: universal Location: 5195487-5195786 bp CRISPR array Location: 5195851-5196430 bp Num of repeats: 10 Spacers: s11-s19 CRISPR array Location: 5195851-5196430 bp Num of repeats: 10 Spacers: s11-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5185976-5186617 bp]: array | spacers
           [Locus range 5195851-5196430 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)