CRISPRone

CRISPRone report for GCA_013284875.1_ASM1328487v1

♦ Seq 1: JABTCB010000019.1 Pseudomonas aeruginosa strain 174581 17-4581_ctg_19, whole genome shotgun sequence

⇒Summary: seq-len = 140123 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 138431-140020 bp Zoom in on locus 1 x27 CRISPR array Location: 138431-140020 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 138431-140020 bp Num of repeats: 27 Spacers: s1-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 138431-140020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABTCB010000032.1 Pseudomonas aeruginosa strain 174581 17-4581_ctg_32, whole genome shotgun sequence

⇒Summary: seq-len = 52791 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32985-41246 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 32985-35351 bp Gene: unk Type: unknown Location: 35744-36391 bp Gene: unk Type: unknown Location: 36457-36825 bp Gene: COG2378:WYL Type: other Location: 36875-37717 bp Gene: unk Type: unknown Location: 37995-38216 bp Gene: pfam13280:WYL Type: other Location: 38459-39475 bp Gene: mkCas0115:csx3 Type: other Location: 39534-41246 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JABTCB010000012.1 Pseudomonas aeruginosa strain 174581 17-4581_ctg_12, whole genome shotgun sequence

⇒Summary: seq-len = 208214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59649-60636 bp Zoom in on locus 1 x17 CRISPR array Location: 59649-60636 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 59649-60636 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 59649-60636 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JABTCB010000006.1 Pseudomonas aeruginosa strain 174581 17-4581_ctg_6, whole genome shotgun sequence

⇒Summary: seq-len = 335248 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 325501-335109 bp Zoom in on locus 1 x22 CRISPR array Location: 325501-326786 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 325501-326786 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09739:cas6f Type: other Location: 326970-327533 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 327537-328565 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 328576-329559 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 329546-330850 bp Gene: COG1203:cas3 Type: Type-I Location: 330908-334138 bp Gene: cd09718:cas1 Type: universal Location: 334135-335109 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 325501-326786 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)