CRISPRone

CRISPRone report for GCA_013328495.1_ASM1332849v1

♦ Seq 1: JABUGL010000020.1 Pseudomonas aeruginosa strain MONT13 ctg_MONT13_20, whole genome shotgun sequence

⇒Summary: seq-len = 158957 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 108931-109558 bp Zoom in on locus 1 x11 CRISPR array Location: 108931-109558 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 108931-109558 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 108931-109558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABUGL010000036.1 Pseudomonas aeruginosa strain MONT13 ctg_MONT13_36, whole genome shotgun sequence

⇒Summary: seq-len = 46199 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3284-13869 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 3284-4153 bp Gene: pfam00078:RT Type: other Location: 9062-10330 bp Gene: unk Type: unknown Location: 10480-10878 bp Gene: unk Type: unknown Location: 11062-11241 bp Gene: cls000170:cas4 Type: Type-I Location: 12325-13869 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)