CRISPRone

CRISPRone report for GCA_013328555.1_ASM1332855v1

♦ Seq 1: JABUGP010000023.1 Pseudomonas aeruginosa strain LILL05 ctg_LILL05_23, whole genome shotgun sequence

⇒Summary: seq-len = 47043 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149-8860 bp Zoom in on locus 1 x7 Gene: cd09718:cas1 Type: universal Location: 149-1123 bp Gene: COG1203:cas3 Type: Type-I Location: 1120-4350 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4408-5712 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5699-6682 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 6693-7721 bp Gene: cd09739:cas6f Type: other Location: 7725-8288 bp CRISPR array Location: 8473-8860 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 8473-8860 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8473-8860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABUGP010000036.1 Pseudomonas aeruginosa strain LILL05 ctg_LILL05_36, whole genome shotgun sequence

⇒Summary: seq-len = 1644 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 133-1541 bp Zoom in on locus 1 x24 CRISPR array Location: 133-1541 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 133-1541 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 133-1541 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JABUGP010000001.1 Pseudomonas aeruginosa strain LILL05 ctg_LILL05_1, whole genome shotgun sequence

⇒Summary: seq-len = 718998 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 127500-128487 bp Zoom in on locus 1 x17 CRISPR array Location: 127500-128487 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 127500-128487 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 127500-128487 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)