CRISPRone

CRISPRone report for GCA_013328615.1_ASM1332861v1

♦ Seq 1: JABUGR010000021.1 Pseudomonas aeruginosa strain HEGP08 ctg_HEGP08_21, whole genome shotgun sequence

⇒Summary: seq-len = 130986 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34031-44715 bp Zoom in on locus 1 x23 x12 CRISPR array Location: 34031-35379 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 34031-35379 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 35639-36613 bp Gene: COG1203:cas3 Type: Type-I Location: 36610-39840 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39898-41202 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41189-42172 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 42183-43211 bp Gene: cd09739:cas6f Type: other Location: 43215-43778 bp CRISPR array Location: 44028-44715 bp Num of repeats: 12 Spacers: s23-s33 CRISPR array Location: 44028-44715 bp Num of repeats: 12 Spacers: s23-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34031-35379 bp]: array | spacers
           [Locus range 44028-44715 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)