CRISPRone

CRISPRone report for GCA_013328625.1_ASM1332862v1

♦ Seq 1: JABUGS010000021.1 Pseudomonas aeruginosa strain GAR02 ctg_GAR02_21, whole genome shotgun sequence

⇒Summary: seq-len = 81856 bp; # of CRISPR array = 2; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33622-44357 bp Zoom in on locus 1 x19 x15 CRISPR array Location: 33622-34730 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33622-34730 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34990-35964 bp Gene: COG1203:cas3 Type: Type-I Location: 35961-39191 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39249-40553 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40540-41523 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41534-42562 bp CRISPR array Location: 43490-44357 bp Num of repeats: 15 Spacers: s19-s32 CRISPR array Location: 43490-44357 bp Num of repeats: 15 Spacers: s19-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33622-34730 bp]: array | spacers
           [Locus range 43490-44357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)