CRISPRone

CRISPRone report for GCA_013328745.1_ASM1332874v1

♦ Seq 1: JABUGX010000001.1 Pseudomonas aeruginosa strain BESA09 ctg_BESA09_1, whole genome shotgun sequence

⇒Summary: seq-len = 880061 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 618314-629009 bp Zoom in on locus 1 x12 x13 CRISPR array Location: 618314-619014 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 618314-619014 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 619788-622469 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 622472-624040 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 624037-624567 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 624577-625719 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 625721-626383 bp Gene: pfam08798:cas6e Type: other Location: 626358-626969 bp Gene: COG1518:cas1 Type: universal Location: 626996-627430 bp Gene: COG1518:cas1 Type: universal Location: 627437-627886 bp Gene: pfam09707:cas2 Type: universal Location: 627883-628182 bp CRISPR array Location: 628247-629009 bp Num of repeats: 13 Spacers: s12-s23 CRISPR array Location: 628247-629009 bp Num of repeats: 13 Spacers: s12-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 618314-619014 bp]: array | spacers
           [Locus range 628247-629009 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)