CRISPRone

CRISPRone report for GCA_013343335.1_ASM1334333v1

♦ Seq 1: CP050323.1 Pseudomonas aeruginosa strain DVT429 chromosome, complete genome

⇒Summary: seq-len = 6805219 bp; # of CRISPR array = 4; # of cas gene = 14  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2787770-2798218 bp 2 Locus 2: 4175570-4185576 bp Zoom in on locus 1 x12 x9 Zoom in on locus 2 x12 x7 CRISPR array Location: 2787770-2788470 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2787770-2788470 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 2789242-2791923 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2791926-2793494 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 2793491-2794021 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 2794031-2795173 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2795175-2795837 bp Gene: pfam08798:cas6e Type: other Location: 2795812-2796423 bp Gene: cd09719:cas1 Type: universal Location: 2796450-2797340 bp Gene: pfam09707:cas2 Type: universal Location: 2797337-2797636 bp CRISPR array Location: 2797701-2798218 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 2797701-2798218 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 4175570-4176258 bp Num of repeats: 12 Spacers: s20-s30 CRISPR array Location: 4175570-4176258 bp Num of repeats: 12 Spacers: s20-s30 Gene: cd09718:cas1 Type: universal Location: 4176515-4177489 bp Gene: COG1203:cas3 Type: Type-I Location: 4177486-4180716 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4181127-4182428 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 4182415-4183398 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 4183409-4184437 bp Gene: cd09739:cas6f Type: other Location: 4184441-4185004 bp CRISPR array Location: 4185188-4185576 bp Num of repeats: 7 Spacers: s31-s36 CRISPR array Location: 4185188-4185576 bp Num of repeats: 7 Spacers: s31-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2787770-2788470 bp]: array | spacers
           [Locus range 2797701-2798218 bp]: array | spacers
           [Locus range 4175570-4176258 bp]: array | spacers
           [Locus range 4185188-4185576 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)