CRISPRone

CRISPRone report for GCA_013343355.1_ASM1334335v1

♦ Seq 1: CP050324.1 Pseudomonas aeruginosa strain DVT427 chromosome, complete genome

⇒Summary: seq-len = 6414921 bp; # of CRISPR array = 3; # of cas gene = 13  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1527911-1528659 bp 2 Locus 2: 2877697-2887832 bp 3 Locus 3: 2952589-2977746 bp Zoom in on locus 1 x13 Zoom in on locus 2 x15 x12 Zoom in on locus 3 CRISPR array Location: 1527911-1528659 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 1527911-1528659 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 2877697-2878565 bp Num of repeats: 15 Spacers: s13-s26 CRISPR array Location: 2877697-2878565 bp Num of repeats: 15 Spacers: s13-s26 Gene: cd09739:cas6f Type: other Location: 2878748-2879311 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2879315-2880343 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2880354-2881337 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2881324-2882628 bp Gene: COG1203:cas3 Type: Type-I Location: 2882686-2885916 bp Gene: cd09718:cas1 Type: universal Location: 2885913-2886887 bp CRISPR array Location: 2887145-2887832 bp Num of repeats: 12 Spacers: s27-s37 CRISPR array Location: 2887145-2887832 bp Num of repeats: 12 Spacers: s27-s37 Gene: cls001593:casR Type: Type-I Location: 2952589-2953068 bp Gene: unk Type: unknown Location: 2953185-2954516 bp Gene: unk Type: unknown Location: 2954639-2956636 bp Gene: cls001593:casR Type: Type-I Location: 2956652-2957131 bp Gene: unk Type: unknown Location: 2957248-2958579 bp Gene: unk Type: unknown Location: 2958702-2960699 bp Gene: cls001593:casR Type: Type-I Location: 2960715-2961194 bp Gene: unk Type: unknown Location: 2961311-2962642 bp Gene: unk Type: unknown Location: 2962765-2964762 bp Gene: cls001593:casR Type: Type-I Location: 2964778-2965257 bp Gene: unk Type: unknown Location: 2965374-2966705 bp Gene: unk Type: unknown Location: 2966828-2968825 bp Gene: cls001593:casR Type: Type-I Location: 2968841-2969320 bp Gene: unk Type: unknown Location: 2969437-2970768 bp Gene: unk Type: unknown Location: 2970891-2972888 bp Gene: cls001593:casR Type: Type-I Location: 2972904-2973383 bp Gene: unk Type: unknown Location: 2973500-2974831 bp Gene: unk Type: unknown Location: 2974954-2977242 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 2977423-2977746 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1527911-1528659 bp]: array | spacers
           [Locus range 2877697-2878565 bp]: array | spacers
           [Locus range 2887145-2887832 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)