CRISPRone

CRISPRone report for GCA_013343435.1_ASM1334343v1

♦ Seq 1: CP050328.1 Pseudomonas aeruginosa strain DVT419 chromosome, complete genome

⇒Summary: seq-len = 6052044 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 947775-956081 bp 2 Locus 2: 4246767-4247274 bp Zoom in on locus 1 x14 Zoom in on locus 2 x9 Gene: COG1203:cas3 Type: Type-I Location: 947775-949649 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 949700-950374 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 950371-952134 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 952146-953015 bp Gene: pfam01930:cas4 Type: Type-I Location: 953034-953666 bp Gene: cd09721:cas1 Type: universal Location: 953786-954709 bp Gene: cd09725:cas2 Type: universal Location: 954719-955009 bp CRISPR array Location: 955191-956081 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 955191-956081 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 4246767-4247274 bp Num of repeats: 9 Spacers: s14-s21 CRISPR array Location: 4246767-4247274 bp Num of repeats: 9 Spacers: s14-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 955191-956081 bp]: array | spacers
           [Locus range 4246767-4247274 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)