CRISPRone

CRISPRone report for GCA_013343535.1_ASM1334353v1

♦ Seq 1: CP050333.1 Pseudomonas aeruginosa strain DVT412 chromosome, complete genome

⇒Summary: seq-len = 6394923 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2728154-2739365 bp Zoom in on locus 1 x23 x16 CRISPR array Location: 2728154-2729503 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 2728154-2729503 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2729763-2730737 bp Gene: COG1203:cas3 Type: Type-I Location: 2730734-2733964 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2734375-2735676 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2735663-2736646 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2736657-2737685 bp Gene: cd09739:cas6f Type: other Location: 2737689-2738252 bp CRISPR array Location: 2738437-2739365 bp Num of repeats: 16 Spacers: s23-s37 CRISPR array Location: 2738437-2739365 bp Num of repeats: 16 Spacers: s23-s37 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2728154-2729503 bp]: array | spacers
           [Locus range 2738437-2739365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)