CRISPRone

CRISPRone report for GCA_013393705.1_ASM1339370v1

♦ Seq 1: CP046404.1 Pseudomonas aeruginosa strain SE5416 chromosome, complete genome

⇒Summary: seq-len = 6874270 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2712409-2723776 bp Zoom in on locus 1 x11 x23 CRISPR array Location: 2712409-2713048 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2712409-2713048 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09641:cas3HD Type: Type-I Location: 2713944-2716625 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2716628-2718196 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 2718193-2718723 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 2718733-2719875 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2719877-2720539 bp Gene: pfam08798:cas6e Type: other Location: 2720514-2721125 bp Gene: cd09719:cas1 Type: universal Location: 2721152-2722042 bp Gene: pfam09707:cas2 Type: universal Location: 2722039-2722338 bp CRISPR array Location: 2722403-2723776 bp Num of repeats: 23 Spacers: s11-s32 CRISPR array Location: 2722403-2723776 bp Num of repeats: 23 Spacers: s11-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2712409-2713048 bp]: array | spacers
           [Locus range 2722403-2723776 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)