CRISPRone

CRISPRone report for GCA_013467585.1_ASM1346758v1

♦ Seq 1: CP058333.1 Pseudomonas aeruginosa strain ACR20 chromosome, complete genome

⇒Summary: seq-len = 6490020 bp; # of CRISPR array = 4; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1306705-1318516 bp 2 Locus 2: 4133951-4135120 bp Zoom in on locus 1 x10 x2 x24 Zoom in on locus 2 x20 CRISPR array Location: 1306705-1307283 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1306705-1307283 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1307377-1307467 bp Num of repeats: 2 Spacers: s10-s10 CRISPR array Location: 1307377-1307467 bp Num of repeats: 2 Spacers: s10-s10 Gene: cd09641:cas3HD Type: Type-I Location: 1308240-1310948 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 1311309-1312877 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 1312874-1313404 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 1313414-1314556 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 1314558-1315220 bp Gene: pfam08798:cas6e Type: other Location: 1315195-1315806 bp Gene: cd09719:cas1 Type: universal Location: 1315833-1316723 bp Gene: pfam09707:cas2 Type: universal Location: 1316720-1317019 bp CRISPR array Location: 1317084-1318516 bp Num of repeats: 24 Spacers: s11-s33 CRISPR array Location: 1317084-1318516 bp Num of repeats: 24 Spacers: s11-s33 CRISPR array Location: 4133951-4135120 bp Num of repeats: 20 Spacers: s34-s52 CRISPR array Location: 4133951-4135120 bp Num of repeats: 20 Spacers: s34-s52 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1306705-1307283 bp]: array | spacers
           [Locus range 1307377-1307467 bp]: array | spacers
           [Locus range 1317084-1318516 bp]: array | spacers
           [Locus range 4133951-4135120 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)