CRISPRone

CRISPRone report for GCA_013467605.1_ASM1346760v1

♦ Seq 1: CP058331.1 Sphingomonas azotifigens strain ACR22 chromosome, complete genome

⇒Summary: seq-len = 6490021 bp; # of CRISPR array = 4; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2074289-2075459 bp 2 Locus 2: 4890890-4902700 bp Zoom in on locus 1 x20 Zoom in on locus 2 x24 x2 x10 CRISPR array Location: 2074289-2075459 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 2074289-2075459 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 4890890-4892321 bp Num of repeats: 24 Spacers: s20-s42 CRISPR array Location: 4890890-4892321 bp Num of repeats: 24 Spacers: s20-s42 Gene: pfam09707:cas2 Type: universal Location: 4892386-4892685 bp Gene: cd09719:cas1 Type: universal Location: 4892682-4893572 bp Gene: pfam08798:cas6e Type: other Location: 4893599-4894138 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4894185-4894847 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4894849-4895991 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4896001-4896531 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 4896528-4898096 bp Gene: cd09641:cas3HD Type: Type-I Location: 4898457-4901165 bp CRISPR array Location: 4901939-4902028 bp Num of repeats: 2 Spacers: s43-s43 CRISPR array Location: 4901939-4902028 bp Num of repeats: 2 Spacers: s43-s43 CRISPR array Location: 4902123-4902700 bp Num of repeats: 10 Spacers: s44-s52 CRISPR array Location: 4902123-4902700 bp Num of repeats: 10 Spacers: s44-s52 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2074289-2075459 bp]: array | spacers
           [Locus range 4890890-4892321 bp]: array | spacers
           [Locus range 4901939-4902028 bp]: array | spacers
           [Locus range 4902123-4902700 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)