CRISPRone

CRISPRone report for GCA_013694025.1_ASM1369402v1

♦ Seq 1: JACEFH010000015.1 Bacteroides fragilis strain BFR_KZ04 NODE_15_length_87312_cov_20.687228, whole genome shotgun sequence

⇒Summary: seq-len = 87312 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8610-12223 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 8610-9509 bp Gene: unk Type: unknown Location: 9506-10771 bp Gene: unk Type: unknown Location: 10779-11552 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 11555-12223 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACEFH010000123.1 Bacteroides fragilis strain BFR_KZ04 NODE_123_length_5648_cov_11.917225, whole genome shotgun sequence

⇒Summary: seq-len = 5648 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2755-4718 bp Zoom in on locus 1 x8 Gene: cd09720:cas1 Type: universal Location: 2755-3687 bp Gene: pfam09827:cas2 Type: universal Location: 3691-4023 bp CRISPR array Location: 4133-4718 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 4133-4718 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4133-4718 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JACEFH010000086.1 Bacteroides fragilis strain BFR_KZ04 NODE_86_length_12541_cov_10.447801, whole genome shotgun sequence

⇒Summary: seq-len = 12541 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-5447 bp Zoom in on locus 1 Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 3-710 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 723-2048 bp Gene: COG1203:cas3 Type: Type-I Location: 2052-4211 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 4201-4764 bp Gene: cd09652:cas6 Type: other Location: 4776-5447 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JACEFH010000057.1 Bacteroides fragilis strain BFR_KZ04 NODE_57_length_23461_cov_22.673481, whole genome shotgun sequence

⇒Summary: seq-len = 23461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 46-781 bp Zoom in on locus 1 x12 CRISPR array Location: 46-781 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 46-781 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 46-781 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)