CRISPRone

CRISPRone report for GCA_013912495.1_ASM1391249v1

♦ Seq 1: JACEOV010000019.1 Pseudomonas aeruginosa strain PAL1.60 NODE_19_length_81990_cov_25.2822, whole genome shotgun sequence

⇒Summary: seq-len = 81990 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33818-44494 bp Zoom in on locus 1 x20 x16 CRISPR array Location: 33818-34986 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 33818-34986 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09718:cas1 Type: universal Location: 35243-36217 bp Gene: COG1203:cas3 Type: Type-I Location: 36214-39444 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39502-40806 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40793-41776 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41787-42815 bp Gene: cd09739:cas6f Type: other Location: 42819-43382 bp CRISPR array Location: 43567-44494 bp Num of repeats: 16 Spacers: s20-s34 CRISPR array Location: 43567-44494 bp Num of repeats: 16 Spacers: s20-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33818-34986 bp]: array | spacers
           [Locus range 43567-44494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)