CRISPRone

CRISPRone report for GCA_013912515.1_ASM1391251v1

♦ Seq 1: JACEOW010000013.1 Pseudomonas aeruginosa strain PAL1.58 NODE_13_length_207707_cov_11.2196, whole genome shotgun sequence

⇒Summary: seq-len = 207707 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 78333-87788 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 78333-79409 bp Gene: pfam13280:WYL Type: other Location: 81773-82648 bp Gene: unk Type: unknown Location: 82778-84358 bp Gene: unk Type: unknown Location: 84382-85029 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 85422-87788 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACEOW010000007.1 Pseudomonas aeruginosa strain PAL1.58 NODE_7_length_246001_cov_15.6359, whole genome shotgun sequence

⇒Summary: seq-len = 246001 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53685-64484 bp Zoom in on locus 1 x12 x26 CRISPR array Location: 53685-54373 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 53685-54373 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 54556-55119 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55123-56151 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56162-57145 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57132-58436 bp Gene: COG1203:cas3 Type: Type-I Location: 58494-61724 bp Gene: cd09718:cas1 Type: universal Location: 61721-62695 bp CRISPR array Location: 62957-64484 bp Num of repeats: 26 Spacers: s12-s36 CRISPR array Location: 62957-64484 bp Num of repeats: 26 Spacers: s12-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53685-54373 bp]: array | spacers
           [Locus range 62957-64484 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)