CRISPRone

CRISPRone report for GCA_013912615.1_ASM1391261v1

♦ Seq 1: JACEPB010000030.1 Pseudomonas aeruginosa strain PAL1.53 NODE_30_length_47218_cov_18.5617, whole genome shotgun sequence

⇒Summary: seq-len = 47218 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38250-47081 bp Zoom in on locus 1 x9 CRISPR array Location: 38250-38758 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 38250-38758 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 38942-39505 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39509-40537 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40548-41531 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41518-42822 bp Gene: COG1203:cas3 Type: Type-I Location: 42880-46110 bp Gene: cd09718:cas1 Type: universal Location: 46107-47081 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38250-38758 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACEPB010000046.1 Pseudomonas aeruginosa strain PAL1.53 NODE_46_length_1512_cov_10.0491, whole genome shotgun sequence

⇒Summary: seq-len = 1512 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 121-1349 bp Zoom in on locus 1 x21 CRISPR array Location: 121-1349 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 121-1349 bp Num of repeats: 21 Spacers: s1-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 121-1349 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JACEPB010000025.1 Pseudomonas aeruginosa strain PAL1.53 NODE_25_length_70202_cov_17.1252, whole genome shotgun sequence

⇒Summary: seq-len = 70202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7057-7564 bp Zoom in on locus 1 x9 CRISPR array Location: 7057-7564 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 7057-7564 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 7057-7564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)