CRISPRone

CRISPRone report for GCA_013912625.1_ASM1391262v1

♦ Seq 1: JACEPC010000026.1 Pseudomonas aeruginosa strain PAL1.52 NODE_26_length_97119_cov_22.7445, whole genome shotgun sequence

⇒Summary: seq-len = 97119 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33282-43726 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 33282-34390 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33282-34390 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34650-35624 bp Gene: COG1203:cas3 Type: Type-I Location: 35621-38851 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38909-40213 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40200-41183 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41194-42222 bp Gene: cd09739:cas6f Type: other Location: 42226-42789 bp CRISPR array Location: 43039-43726 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 43039-43726 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33282-34390 bp]: array | spacers
           [Locus range 43039-43726 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)