CRISPRone

CRISPRone report for GCA_013913145.1_ASM1391314v1

♦ Seq 1: JACEQC010000003.1 Pseudomonas aeruginosa strain PAL1.22 NODE_3_length_461675_cov_17.207, whole genome shotgun sequence

⇒Summary: seq-len = 461675 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141643-152828 bp Zoom in on locus 1 x21 x12 CRISPR array Location: 141643-142892 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 141643-142892 bp Num of repeats: 21 Spacers: s1-s20 Gene: pfam09707:cas2 Type: universal Location: 142957-143256 bp Gene: cd09719:cas1 Type: universal Location: 143253-144143 bp Gene: pfam08798:cas6e Type: other Location: 144170-144709 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 144756-145418 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 145420-146562 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 146572-147102 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 147099-148667 bp Gene: cd09641:cas3HD Type: Type-I Location: 148670-151351 bp CRISPR array Location: 152128-152828 bp Num of repeats: 12 Spacers: s21-s31 CRISPR array Location: 152128-152828 bp Num of repeats: 12 Spacers: s21-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 141643-142892 bp]: array | spacers
           [Locus range 152128-152828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)