CRISPRone

CRISPRone report for GCA_013913205.1_ASM1391320v1

♦ Seq 1: JACEQF010000011.1 Pseudomonas aeruginosa strain PAL1.19 NODE_11_length_246365_cov_16.0707, whole genome shotgun sequence

⇒Summary: seq-len = 246365 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53678-64957 bp Zoom in on locus 1 x20 x26 CRISPR array Location: 53678-54846 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 53678-54846 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 55029-55592 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55596-56624 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56635-57618 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57605-58909 bp Gene: COG1203:cas3 Type: Type-I Location: 58967-62197 bp Gene: cd09718:cas1 Type: universal Location: 62194-63168 bp CRISPR array Location: 63430-64957 bp Num of repeats: 26 Spacers: s20-s44 CRISPR array Location: 63430-64957 bp Num of repeats: 26 Spacers: s20-s44 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53678-54846 bp]: array | spacers
           [Locus range 63430-64957 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)