CRISPRone

CRISPRone report for GCA_013913245.1_ASM1391324v1

♦ Seq 1: JACEQH010000021.1 Pseudomonas aeruginosa strain PAL1.15 NODE_21_length_108046_cov_16.6828, whole genome shotgun sequence

⇒Summary: seq-len = 108046 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53884-66304 bp Zoom in on locus 1 x17 x48 CRISPR array Location: 53884-54872 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 53884-54872 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 55055-55618 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55622-56650 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56661-57644 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57631-58935 bp Gene: COG1203:cas3 Type: Type-I Location: 58993-62223 bp Gene: cd09718:cas1 Type: universal Location: 62220-63194 bp CRISPR array Location: 63456-66304 bp Num of repeats: 48 Spacers: s17-s63 CRISPR array Location: 63456-66304 bp Num of repeats: 48 Spacers: s17-s63 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53884-54872 bp]: array | spacers
           [Locus range 63456-66304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)